EPA Environmental Dataset Gateway


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Title: Cytoscape file of chemical networks
Abstract: The maximum connectivity scores of pairwise chemical conditions summarized from Cmap results in a file with Cytoscape format (http://www.cytoscape.org/). The figures in the publication were generated from this file. The Cytoscape file is formed from importing the eight text file therein. This dataset is associated with the following publication: Wang , R., A. Biales , N. Garcia-Reyero, E. Perkins, D. Villeneuve, G. Ankley, and D. Bencic. Fish Connectivity Mapping: Linking Chemical Stressors by Their MOA-Driven Transcriptomic Profiles. BMC Genomics. BioMed Central Ltd, London, UK, 17(84): 1-20, (2016).
File Identifier: A-s1s7-137
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Distribution Title CmapCytoScapeFigures.zip
Download URL https://pasteur.epa.gov/uploads/137/CmapCytoScapeFigures.zip
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Access Level: Public
License: https://pasteur.epa.gov/license/sciencehub-license.html
Open/Close section Metadata Dates
Date Modified: 2015-12-03
Open/Close section Contact Information
Organization: U.S. EPA Office of Research and Development (ORD)
Contact Person: Ronglin Wang
Email: wang.rong-lin@epa.gov
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Related Documents: https://doi.org/10.1186/s12864-016-2406-y
Data Dictionary: https://pasteur.epa.gov/uploads/137/documents/CmapCytoscapeFigures.dictionary.xlsx