EPA Environmental Dataset Gateway


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Title: Cytoscape file of chemical networks
Abstract: The maximum connectivity scores of pairwise chemical conditions summarized from Cmap results in a file with Cytoscape format (http://www.cytoscape.org/). The figures in the publication were generated from this file. The Cytoscape file is formed from importing the eight text file therein. This dataset is associated with the following publication: Wang , R., A. Biales , N. Garcia-Reyero, E. Perkins, D. Villeneuve, G. Ankley, and D. Bencic. Fish Connectivity Mapping: Linking Chemical Stressors by Their MOA-Driven Transcriptomic Profiles. BMC Genomics. BioMed Central Ltd, London, UK, 17(84): 1-20, (2016).
File Identifier: A-s1s7-137
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Download URL https://pasteur.epa.gov/uploads/A-s1s7/137/CmapCytoScapeFigures.zip
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Access Level: Public
Rights: https://pasteur.epa.gov/disclaimer/sciencehub-disclaimer-epa.html
License: https://edg.epa.gov/EPA_Data_License.html
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Date Modified: 2015-12-03
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Organization: U.S. EPA Office of Research and Development (ORD)
Contact Person: Ronglin Wang
Email: wang.rong-lin@epa.gov
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Related Documents: https://pasteur.epa.gov/uploads/A-s1s7/137/documents/WangRonglin_A-s1s7_QASum_20160719.CmapCytoscapeFigures.docx
Data Dictionary: https://pasteur.epa.gov/uploads/A-s1s7/137/documents/CmapCytoscapeFigures.dictionary.xlsx